Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV9Q99603 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV9Q99603 DRAXINP1-201ENST00000437611 948 ntBASIC13.27□□□□□ -0.29
TRGV9Q99603 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.27□□□□□ -0.29
TRGV9Q99603 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 DUX4L17-201ENST00000557360 1267 ntBASIC13.27□□□□□ -0.29
TRGV9Q99603 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TRGV9Q99603 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.27□□□□□ -0.29
TRGV9Q99603 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 KRT18P1-202ENST00000452408 1331 ntBASIC13.27□□□□□ -0.29
TRGV9Q99603 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 AC016734.2-201ENST00000624325 1377 ntBASIC13.27□□□□□ -0.29
TRGV9Q99603 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV9Q99603 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.27□□□□□ -0.29
TRGV9Q99603 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.27□□□□□ -0.29
TRGV9Q99603 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRGV9Q99603 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV9Q99603 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRGV9Q99603 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRGV9Q99603 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.26□□□□□ -0.29
TRGV9Q99603 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 AP002414.1-201ENST00000391405 1147 ntBASIC13.26□□□□□ -0.29
TRGV9Q99603 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 SPDYE21P-201ENST00000413323 827 ntBASIC13.26□□□□□ -0.29
TRGV9Q99603 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV9Q99603 AC096582.2-201ENST00000510860 516 ntBASIC13.26□□□□□ -0.29
TRGV9Q99603 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV9Q99603 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV9Q99603 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 AC006538.1-201ENST00000567905 1585 ntBASIC13.26□□□□□ -0.29
TRGV9Q99603 RN7SL850P-201ENST00000579959 291 ntBASIC13.26□□□□□ -0.29
TRGV9Q99603 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.26□□□□□ -0.29
TRGV9Q99603 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV9Q99603 AP000867.4-201ENST00000641616 219 ntBASIC13.26□□□□□ -0.29
TRGV9Q99603 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRGV9Q99603 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.26□□□□□ -0.29
TRGV9Q99603 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.26□□□□□ -0.29
TRGV9Q99603 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRGV9Q99603 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.25□□□□□ -0.29
TRGV9Q99603 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV9Q99603 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRGV9Q99603 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.25□□□□□ -0.29
TRGV9Q99603 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV9Q99603 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV9Q99603 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV9Q99603 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRGV9Q99603 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms