Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH4Q99466 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH4Q99466 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH4Q99466 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH4Q99466 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH4Q99466 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH4Q99466 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 AC063926.2-201ENST00000623766 1308 ntBASIC17.29■□□□□ 0.36
NOTCH4Q99466 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NOTCH4Q99466 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 AC010336.2-201ENST00000564226 506 ntBASIC17.28■□□□□ 0.36
NOTCH4Q99466 AC008738.7-201ENST00000609744 511 ntBASIC17.28■□□□□ 0.36
NOTCH4Q99466 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 PP12613-201ENST00000424958 2230 ntBASIC17.28■□□□□ 0.36
NOTCH4Q99466 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.28■□□□□ 0.36
NOTCH4Q99466 AC007274.1-201ENST00000439805 662 ntBASIC17.28■□□□□ 0.36
NOTCH4Q99466 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.28■□□□□ 0.36
NOTCH4Q99466 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NOTCH4Q99466 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH4Q99466 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH4Q99466 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
NOTCH4Q99466 AC092053.1-201ENST00000605787 1936 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.27■□□□□ 0.36
NOTCH4Q99466 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.27■□□□□ 0.36
NOTCH4Q99466 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH4Q99466 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH4Q99466 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH4Q99466 COX5BP8-201ENST00000416911 349 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH4Q99466 AL596325.1-201ENST00000563991 1082 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 AC021097.1-201ENST00000607902 574 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 AC009118.2-201ENST00000613275 655 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 IGHV3-72-202ENST00000621503 303 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 AP001350.2-201ENST00000625104 1094 ntBASIC17.27■□□□□ 0.36
NOTCH4Q99466 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH4Q99466 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NOTCH4Q99466 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NOTCH4Q99466 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.27■□□□□ 0.35
NOTCH4Q99466 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NOTCH4Q99466 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
NOTCH4Q99466 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NOTCH4Q99466 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.27■□□□□ 0.35
NOTCH4Q99466 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NOTCH4Q99466 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 PIN1P1-201ENST00000412108 996 ntBASIC17.26■□□□□ 0.35
NOTCH4Q99466 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH4Q99466 AC007613.1-201ENST00000572811 2597 ntBASIC17.26■□□□□ 0.35
NOTCH4Q99466 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH4Q99466 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms