Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 AL603832.2-201ENST00000566195 2125 ntBASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 KRT18P65-201ENST00000439811 1286 ntBASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 AP000692.2-201ENST00000608391 879 ntBASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IPQ96QF0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 CA15P1-201ENST00000481698 905 ntBASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IPQ96QF0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 EGFEM1P-202ENST00000431685 1563 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AL596087.1-201ENST00000400979 1969 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AL009178.2-201ENST00000597278 2719 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 KRASP1-201ENST00000407852 552 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AC011506.1-201ENST00000474329 610 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AC002558.1-201ENST00000488906 803 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AP003097.1-201ENST00000530657 1135 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 AC010240.3-201ENST00000607688 395 ntBASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IPQ96QF0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms