Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 CROCCP4-201ENST00000457096 498 ntBASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AL138918.1-201ENST00000568306 659 ntBASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AC243960.2-201ENST00000600996 747 ntBASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 AL645728.2-201ENST00000641974 660 ntBASIC14.31□□□□□ -0.12
CSMD1Q96PZ7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 AC016027.1-202ENST00000607927 1699 ntBASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 AC008267.7-201ENST00000624570 1194 ntBASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 HMGA1P7-201ENST00000406908 502 ntBASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 AC234783.1-201ENST00000441761 496 ntBASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 BICD1-207ENST00000551848 1962 ntBASIC14.3□□□□□ -0.12
CSMD1Q96PZ7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 FXNP2-201ENST00000411625 547 ntBASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD1Q96PZ7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms