Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX27Q96L92 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 ACTG1P14-201ENST00000446382 1122 ntBASIC18.27■□□□□ 0.52
SNX27Q96L92 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SNX27Q96L92 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX27Q96L92 AC112191.1-201ENST00000523689 701 ntBASIC18.27■□□□□ 0.52
SNX27Q96L92 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
SNX27Q96L92 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.27■□□□□ 0.52
SNX27Q96L92 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.27■□□□□ 0.52
SNX27Q96L92 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SNX27Q96L92 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX27Q96L92 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX27Q96L92 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNX27Q96L92 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.27■□□□□ 0.51
SNX27Q96L92 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SNX27Q96L92 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SNX27Q96L92 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX27Q96L92 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX27Q96L92 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX27Q96L92 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNX27Q96L92 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX27Q96L92 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX27Q96L92 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNX27Q96L92 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNX27Q96L92 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX27Q96L92 AL645608.8-201ENST00000606034 2086 ntBASIC18.26■□□□□ 0.51
SNX27Q96L92 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.25■□□□□ 0.51
SNX27Q96L92 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.25■□□□□ 0.51
SNX27Q96L92 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.25■□□□□ 0.51
SNX27Q96L92 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNX27Q96L92 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 OR8S1-201ENST00000310194 1080 ntBASIC18.25■□□□□ 0.51
SNX27Q96L92 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNX27Q96L92 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 AC002056.1-201ENST00000395613 760 ntBASIC18.25■□□□□ 0.51
SNX27Q96L92 ADH5P3-201ENST00000433842 1137 ntBASIC18.25■□□□□ 0.51
SNX27Q96L92 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX27Q96L92 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX27Q96L92 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.25■□□□□ 0.51
SNX27Q96L92 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.25■□□□□ 0.51
SNX27Q96L92 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.25■□□□□ 0.51
SNX27Q96L92 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 AC099522.2-201ENST00000607001 744 ntBASIC18.25■□□□□ 0.51
SNX27Q96L92 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 AC131009.4-201ENST00000624048 1740 ntBASIC18.25■□□□□ 0.51
SNX27Q96L92 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNX27Q96L92 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.25■□□□□ 0.51
SNX27Q96L92 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX27Q96L92 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX27Q96L92 TUBB8P12-201ENST00000308911 1335 ntBASIC18.24■□□□□ 0.51
SNX27Q96L92 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SNX27Q96L92 TUBB7P-202ENST00000428444 1305 ntBASIC18.24■□□□□ 0.51
SNX27Q96L92 TUBB8P7-204ENST00000567960 1332 ntBASIC18.24■□□□□ 0.51
SNX27Q96L92 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SNX27Q96L92 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX27Q96L92 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SNX27Q96L92 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SNX27Q96L92 AC108860.2-201ENST00000562760 2183 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms