Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 AC092658.1-201ENST00000505836 891 ntBASIC19.65■□□□□ 0.74
CDCA5Q96FF9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 AC093503.3-201ENST00000624917 2352 ntBASIC19.65■□□□□ 0.74
CDCA5Q96FF9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 AL023806.1-201ENST00000603994 1649 ntBASIC19.65■□□□□ 0.74
CDCA5Q96FF9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDCA5Q96FF9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CDCA5Q96FF9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDCA5Q96FF9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
CDCA5Q96FF9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDCA5Q96FF9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.64■□□□□ 0.74
CDCA5Q96FF9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 SPDYE18-201ENST00000510091 1050 ntBASIC19.64■□□□□ 0.73
CDCA5Q96FF9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 KRT8P49-201ENST00000604166 1432 ntBASIC19.64■□□□□ 0.73
CDCA5Q96FF9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA5Q96FF9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 RN7SL837P-201ENST00000463010 287 ntBASIC19.63■□□□□ 0.73
CDCA5Q96FF9 RN7SL618P-201ENST00000477850 296 ntBASIC19.63■□□□□ 0.73
CDCA5Q96FF9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA5Q96FF9 AC073439.1-201ENST00000624121 1774 ntBASIC19.62■□□□□ 0.73
CDCA5Q96FF9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 AL512361.1-201ENST00000554200 418 ntBASIC19.62■□□□□ 0.73
CDCA5Q96FF9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms