Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
DDX1Q92499 AL021920.2-201ENST00000624828 1351 ntBASIC18.08■□□□□ 0.49
DDX1Q92499 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX1Q92499 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.08■□□□□ 0.49
DDX1Q92499 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
DDX1Q92499 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 AC010327.4-202ENST00000591484 748 ntBASIC18.08■□□□□ 0.48
DDX1Q92499 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX1Q92499 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 AL805961.1-202ENST00000641562 540 ntBASIC18.08■□□□□ 0.48
DDX1Q92499 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
DDX1Q92499 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DDX1Q92499 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX1Q92499 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX1Q92499 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 AL391256.1-201ENST00000443260 1855 ntBASIC18.07■□□□□ 0.48
DDX1Q92499 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX1Q92499 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
DDX1Q92499 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX1Q92499 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 MED15P5-201ENST00000423150 992 ntBASIC18.07■□□□□ 0.48
DDX1Q92499 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX1Q92499 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.07■□□□□ 0.48
DDX1Q92499 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 MIR7706-201ENST00000613747 67 ntBASIC18.07■□□□□ 0.48
DDX1Q92499 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DDX1Q92499 REXO1L3P-201ENST00000622202 1288 ntBASIC18.07■□□□□ 0.48
DDX1Q92499 FAM215A-202ENST00000632077 792 ntBASIC18.07■□□□□ 0.48
DDX1Q92499 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
DDX1Q92499 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX1Q92499 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX1Q92499 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX1Q92499 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX1Q92499 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX1Q92499 AC002310.6-201ENST00000624451 1377 ntBASIC18.06■□□□□ 0.48
DDX1Q92499 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX1Q92499 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
DDX1Q92499 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX1Q92499 HLA-A-202ENST00000376806 1854 ntBASIC18.06■□□□□ 0.48
DDX1Q92499 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX1Q92499 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX1Q92499 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX1Q92499 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 AC087163.2-201ENST00000457299 853 ntBASIC18.06■□□□□ 0.48
DDX1Q92499 AP002490.2-201ENST00000524791 560 ntBASIC18.06■□□□□ 0.48
DDX1Q92499 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX1Q92499 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX1Q92499 AC006557.2-201ENST00000592985 1240 ntBASIC18.06■□□□□ 0.48
DDX1Q92499 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX1Q92499 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX1Q92499 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX1Q92499 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX1Q92499 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX1Q92499 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
DDX1Q92499 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX1Q92499 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms