Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.26■□□□□ 0.03
RNF138Q8WVD3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF138Q8WVD3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 ACTG1P14-201ENST00000446382 1122 ntBASIC15.25■□□□□ 0.03
RNF138Q8WVD3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 AC112191.1-201ENST00000523689 701 ntBASIC15.25■□□□□ 0.03
RNF138Q8WVD3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF138Q8WVD3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 AC012313.1-201ENST00000593393 3059 ntBASIC15.24■□□□□ 0.03
RNF138Q8WVD3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 GGT4P-201ENST00000623672 1708 ntBASIC15.24■□□□□ 0.03
RNF138Q8WVD3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 UPF3AP3-201ENST00000420996 769 ntBASIC15.24■□□□□ 0.03
RNF138Q8WVD3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 FAM58CP-201ENST00000435741 640 ntBASIC15.24■□□□□ 0.03
RNF138Q8WVD3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF138Q8WVD3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms