Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 AL512638.1-201ENST00000457493 794 ntBASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 AC022494.1-201ENST00000466044 728 ntBASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 RN7SL589P-201ENST00000481268 310 ntBASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2AF1L4Q8WU68 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 DUTP2-201ENST00000519164 463 ntBASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.42■□□□□ 0.7
U2AF1L4Q8WU68 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 RBPMS2P1-201ENST00000437762 623 ntBASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 AC243562.1-201ENST00000560672 389 ntBASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
U2AF1L4Q8WU68 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms