Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AK2-215ENST00000629371 3576 ntTSL 3 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 AP000897.1-201ENST00000584036 1613 ntBASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 HIPK1-203ENST00000369553 2883 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 KIAA1324-203ENST00000369939 3442 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 AC093915.1-201ENST00000605740 1543 ntBASIC10.5□□□□□ -0.73
SVIPQ8NHG7 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 HK2P1-201ENST00000447818 2737 ntBASIC10.5□□□□□ -0.73
SVIPQ8NHG7 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 AC010307.3-202ENST00000515122 3142 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SERAC1-205ENST00000607000 2284 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 AC092068.3-201ENST00000587894 2016 ntBASIC10.5□□□□□ -0.73
SVIPQ8NHG7 NAA50-210ENST00000616174 3257 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
SVIPQ8NHG7 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 AL138690.1-201ENST00000568811 2243 ntBASIC10.49□□□□□ -0.73
SVIPQ8NHG7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 SETP4-201ENST00000455717 868 ntBASIC10.49□□□□□ -0.73
SVIPQ8NHG7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 CDH4-201ENST00000543233 3117 ntTSL 2 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 AC046158.4-201ENST00000623121 1347 ntBASIC10.49□□□□□ -0.73
SVIPQ8NHG7 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.49□□□□□ -0.73
SVIPQ8NHG7 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms