Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF248Q8NDW4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF248Q8NDW4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AL671277.1-201ENST00000429656 993 ntBASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 RN7SL589P-201ENST00000481268 310 ntBASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AC069335.1-201ENST00000489972 472 ntBASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AC051619.7-201ENST00000568314 623 ntBASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AC008764.6-201ENST00000595909 2069 ntBASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 AC068880.1-201ENST00000507289 2297 ntBASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF248Q8NDW4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AP000997.3-201ENST00000623333 2250 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 TFAMP1-201ENST00000412727 736 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 FAM207CP-201ENST00000443486 507 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 GAPDHP21-201ENST00000450301 1010 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AL512356.2-201ENST00000546955 174 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 RN7SL204P-201ENST00000582831 262 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC106820.2-201ENST00000563775 3264 ntBASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF248Q8NDW4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms