Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
C3orf56Q8N813 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.28□□□□□ -0.28
C3orf56Q8N813 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.28□□□□□ -0.28
C3orf56Q8N813 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.28□□□□□ -0.28
C3orf56Q8N813 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C3orf56Q8N813 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C3orf56Q8N813 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
C3orf56Q8N813 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C3orf56Q8N813 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C3orf56Q8N813 AC093677.2-201ENST00000600169 1863 ntBASIC13.27□□□□□ -0.28
C3orf56Q8N813 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
C3orf56Q8N813 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
C3orf56Q8N813 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.27□□□□□ -0.28
C3orf56Q8N813 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 AC092580.3-201ENST00000430932 139 ntBASIC13.27□□□□□ -0.29
C3orf56Q8N813 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 MIR4453-201ENST00000584019 89 ntBASIC13.27□□□□□ -0.29
C3orf56Q8N813 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C3orf56Q8N813 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.27□□□□□ -0.29
C3orf56Q8N813 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.26□□□□□ -0.29
C3orf56Q8N813 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.26□□□□□ -0.29
C3orf56Q8N813 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C3orf56Q8N813 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
C3orf56Q8N813 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms