Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PGBD3Q8N328 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.25■□□□□ 0.35
PGBD3Q8N328 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 AC087163.2-201ENST00000457299 853 ntBASIC17.25■□□□□ 0.35
PGBD3Q8N328 AC023141.5-201ENST00000458585 616 ntBASIC17.25■□□□□ 0.35
PGBD3Q8N328 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 LINC00628-201ENST00000628516 1289 ntBASIC17.25■□□□□ 0.35
PGBD3Q8N328 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.25■□□□□ 0.35
PGBD3Q8N328 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.25■□□□□ 0.35
PGBD3Q8N328 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PGBD3Q8N328 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.24■□□□□ 0.35
PGBD3Q8N328 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 AC005237.2-201ENST00000434368 219 ntBASIC17.24■□□□□ 0.35
PGBD3Q8N328 FAM86GP-201ENST00000448322 971 ntBASIC17.24■□□□□ 0.35
PGBD3Q8N328 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 SLC25A6P2-201ENST00000497974 877 ntBASIC17.24■□□□□ 0.35
PGBD3Q8N328 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 AL139327.4-201ENST00000612362 153 ntBASIC17.24■□□□□ 0.35
PGBD3Q8N328 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PGBD3Q8N328 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PGBD3Q8N328 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PGBD3Q8N328 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 REXO1L11P-201ENST00000620964 1927 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.23■□□□□ 0.35
PGBD3Q8N328 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 AL121761.2-201ENST00000598007 1648 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PGBD3Q8N328 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.23■□□□□ 0.35
PGBD3Q8N328 AL671277.1-201ENST00000429656 993 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 SPDYE11-202ENST00000450699 704 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 HLA-J-203ENST00000494367 1087 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PGBD3Q8N328 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 SPDYE9P-201ENST00000570642 692 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.23■□□□□ 0.35
PGBD3Q8N328 AC026120.1-201ENST00000611536 926 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 SPDYE10P-202ENST00000612005 668 ntBASIC17.23■□□□□ 0.35
PGBD3Q8N328 SPDYE8P-202ENST00000612377 668 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms