Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.08■□□□□ 0
LINC00346Q8IVM7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 AP005117.1-201ENST00000584346 1413 ntBASIC15.08■□□□□ 0
LINC00346Q8IVM7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00346Q8IVM7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
LINC00346Q8IVM7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.06■□□□□ 0
LINC00346Q8IVM7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 MIR3652-201ENST00000579335 131 ntBASIC15.06■□□□□ 0
LINC00346Q8IVM7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 AC073592.4-201ENST00000623827 446 ntBASIC15.06■□□□□ 0
LINC00346Q8IVM7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms