Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 MYCLP2-201ENST00000449268 967 ntBASIC21.05■□□□□ 0.96
COL23A1Q86Y22 BNIP3P42-201ENST00000454982 569 ntBASIC21.05■□□□□ 0.96
COL23A1Q86Y22 AC055876.2-201ENST00000531834 546 ntBASIC21.05■□□□□ 0.96
COL23A1Q86Y22 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 BNIP3P29-201ENST00000598302 571 ntBASIC21.05■□□□□ 0.96
COL23A1Q86Y22 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 AC133552.6-201ENST00000613406 534 ntBASIC21.05■□□□□ 0.96
COL23A1Q86Y22 AC011447.5-201ENST00000616168 564 ntBASIC21.05■□□□□ 0.96
COL23A1Q86Y22 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.05■□□□□ 0.96
COL23A1Q86Y22 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 ANKRD19P-201ENST00000338192 862 ntBASIC21.04■□□□□ 0.96
COL23A1Q86Y22 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.04■□□□□ 0.96
COL23A1Q86Y22 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 SRD5A3P1-201ENST00000603021 949 ntBASIC21.04■□□□□ 0.96
COL23A1Q86Y22 AL109936.8-201ENST00000641772 604 ntBASIC21.04■□□□□ 0.96
COL23A1Q86Y22 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL23A1Q86Y22 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 AC073439.1-201ENST00000624121 1774 ntBASIC21.03■□□□□ 0.96
COL23A1Q86Y22 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 AC098850.1-201ENST00000419919 790 ntBASIC21.03■□□□□ 0.96
COL23A1Q86Y22 AC234783.1-201ENST00000441761 496 ntBASIC21.03■□□□□ 0.96
COL23A1Q86Y22 CROCCP4-201ENST00000457096 498 ntBASIC21.03■□□□□ 0.96
COL23A1Q86Y22 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.03■□□□□ 0.96
COL23A1Q86Y22 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.03■□□□□ 0.96
COL23A1Q86Y22 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 AC138028.4-201ENST00000564984 1845 ntBASIC21.02■□□□□ 0.96
COL23A1Q86Y22 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 MIR6787-201ENST00000616675 61 ntBASIC21.02■□□□□ 0.96
COL23A1Q86Y22 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms