Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 YBX2P1-201ENST00000394192 760 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 KRT18P13-201ENST00000400056 1290 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 DNAJB3-201ENST00000446806 729 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 AC091167.2-201ENST00000579581 588 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 MTDHP5-201ENST00000598980 586 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 AL353732.1-201ENST00000569618 1459 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 AC012313.1-201ENST00000593393 3059 ntBASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRTM4Q86VH4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRRTM4Q86VH4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 MCCD1P2-201ENST00000423228 335 ntBASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 AC074386.1-202ENST00000463561 864 ntBASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 MIR4515-201ENST00000584082 81 ntBASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 AL645728.2-201ENST00000641974 660 ntBASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms