Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 MIR4515-201ENST00000584082 81 ntBASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H3F3CQ6NXT2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AC005412.3-201ENST00000580309 715 ntBASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AC084018.2-201ENST00000613093 2607 ntBASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H3F3CQ6NXT2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 AC140658.5-201ENST00000438532 169 ntBASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H3F3CQ6NXT2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms