Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 KRT8P49-201ENST00000604166 1432 ntBASIC20.29■□□□□ 0.84
RNF20Q5VTR2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 AF228730.7-201ENST00000641842 219 ntBASIC20.29■□□□□ 0.84
RNF20Q5VTR2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF20Q5VTR2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 DUSP5P1-201ENST00000441325 1139 ntBASIC20.28■□□□□ 0.84
RNF20Q5VTR2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 PAWRP1-201ENST00000451083 565 ntBASIC20.28■□□□□ 0.84
RNF20Q5VTR2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RNF20Q5VTR2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 PTCHD3P3-201ENST00000403073 906 ntBASIC20.27■□□□□ 0.84
RNF20Q5VTR2 OR7E14P-202ENST00000530490 1290 ntBASIC20.27■□□□□ 0.84
RNF20Q5VTR2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF20Q5VTR2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms