Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRFAM7AQ494W8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 UPF3AP3-201ENST00000420996 769 ntBASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 AL049840.3-201ENST00000602669 611 ntBASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 LINC02084-201ENST00000606069 1096 ntBASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRFAM7AQ494W8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 AC106886.4-201ENST00000623557 2502 ntBASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 MED15P5-201ENST00000423150 992 ntBASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 PGAM5P1-201ENST00000518923 814 ntBASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 AL355877.3-201ENST00000622820 899 ntBASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 AC116407.3-201ENST00000623905 1129 ntBASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 REXO1L11P-201ENST00000620964 1927 ntBASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRFAM7AQ494W8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRFAM7AQ494W8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms