Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.72■□□□□ 0.75
SSRP1Q08945 PGM5P2-202ENST00000637225 1043 ntBASIC19.72■□□□□ 0.75
SSRP1Q08945 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSRP1Q08945 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSRP1Q08945 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.72■□□□□ 0.75
SSRP1Q08945 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.72■□□□□ 0.75
SSRP1Q08945 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSRP1Q08945 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.71■□□□□ 0.75
SSRP1Q08945 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SSRP1Q08945 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
SSRP1Q08945 AC009078.2-202ENST00000463353 338 ntBASIC19.71■□□□□ 0.75
SSRP1Q08945 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.71■□□□□ 0.75
SSRP1Q08945 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSRP1Q08945 AC008667.4-201ENST00000607370 168 ntBASIC19.71■□□□□ 0.75
SSRP1Q08945 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.71■□□□□ 0.75
SSRP1Q08945 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.71■□□□□ 0.75
SSRP1Q08945 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.71■□□□□ 0.75
SSRP1Q08945 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.71■□□□□ 0.75
SSRP1Q08945 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.71■□□□□ 0.75
SSRP1Q08945 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 AC078925.2-201ENST00000624013 1973 ntBASIC19.71■□□□□ 0.75
SSRP1Q08945 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SSRP1Q08945 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.71■□□□□ 0.75
SSRP1Q08945 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.71■□□□□ 0.75
SSRP1Q08945 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSRP1Q08945 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
SSRP1Q08945 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.7■□□□□ 0.74
SSRP1Q08945 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.7■□□□□ 0.74
SSRP1Q08945 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SSRP1Q08945 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.7■□□□□ 0.74
SSRP1Q08945 AC092910.1-201ENST00000482027 1129 ntBASIC19.7■□□□□ 0.74
SSRP1Q08945 SLC25A6P2-201ENST00000497974 877 ntBASIC19.7■□□□□ 0.74
SSRP1Q08945 IGHV3-65-201ENST00000523210 341 ntBASIC19.7■□□□□ 0.74
SSRP1Q08945 AP002490.2-201ENST00000524791 560 ntBASIC19.7■□□□□ 0.74
SSRP1Q08945 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.7■□□□□ 0.74
SSRP1Q08945 SLC25A6P4-201ENST00000586535 553 ntBASIC19.7■□□□□ 0.74
SSRP1Q08945 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.7■□□□□ 0.74
SSRP1Q08945 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SSRP1Q08945 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.7■□□□□ 0.74
SSRP1Q08945 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSRP1Q08945 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.7■□□□□ 0.74
SSRP1Q08945 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.7■□□□□ 0.74
SSRP1Q08945 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSRP1Q08945 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 FLJ38576-201ENST00000623820 2459 ntBASIC19.69■□□□□ 0.74
SSRP1Q08945 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.69■□□□□ 0.74
SSRP1Q08945 RNA5SP419-201ENST00000515908 135 ntBASIC19.69■□□□□ 0.74
SSRP1Q08945 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 AL662844.1-201ENST00000546340 181 ntBASIC19.69■□□□□ 0.74
SSRP1Q08945 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.69■□□□□ 0.74
SSRP1Q08945 AP001005.1-201ENST00000571755 1248 ntBASIC19.69■□□□□ 0.74
SSRP1Q08945 MIR7706-201ENST00000613747 67 ntBASIC19.69■□□□□ 0.74
SSRP1Q08945 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSRP1Q08945 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SSRP1Q08945 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SSRP1Q08945 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms