Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.39□□□□□ -0.11
COL10A1Q03692 AC124947.2-201ENST00000547118 1133 ntBASIC14.39□□□□□ -0.11
COL10A1Q03692 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.39□□□□□ -0.11
COL10A1Q03692 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.39□□□□□ -0.11
COL10A1Q03692 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.39□□□□□ -0.11
COL10A1Q03692 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL10A1Q03692 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.39□□□□□ -0.11
COL10A1Q03692 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
COL10A1Q03692 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL10A1Q03692 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL10A1Q03692 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 AC092068.3-201ENST00000587894 2016 ntBASIC14.39□□□□□ -0.11
COL10A1Q03692 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
COL10A1Q03692 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL10A1Q03692 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
COL10A1Q03692 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL10A1Q03692 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.38□□□□□ -0.11
COL10A1Q03692 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
COL10A1Q03692 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL10A1Q03692 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.38□□□□□ -0.11
COL10A1Q03692 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 SCARNA2-201ENST00000458748 420 ntBASIC14.38□□□□□ -0.11
COL10A1Q03692 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 SART3-203ENST00000546611 1184 ntBASIC14.38□□□□□ -0.11
COL10A1Q03692 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.38□□□□□ -0.11
COL10A1Q03692 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.38□□□□□ -0.11
COL10A1Q03692 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.38□□□□□ -0.11
COL10A1Q03692 AC064862.7-201ENST00000604520 867 ntBASIC14.38□□□□□ -0.11
COL10A1Q03692 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.38□□□□□ -0.11
COL10A1Q03692 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL10A1Q03692 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 NCF1C-201ENST00000438382 1427 ntBASIC14.38□□□□□ -0.11
COL10A1Q03692 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.38□□□□□ -0.11
COL10A1Q03692 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.38□□□□□ -0.11
COL10A1Q03692 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL10A1Q03692 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 AC005915.1-201ENST00000624912 2018 ntBASIC14.37□□□□□ -0.11
COL10A1Q03692 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COL10A1Q03692 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.37□□□□□ -0.11
COL10A1Q03692 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.37□□□□□ -0.11
COL10A1Q03692 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
COL10A1Q03692 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL10A1Q03692 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms