Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC008608.2-201ENST00000606089 416 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CX3CL1P78423 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CX3CL1P78423 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 AC093525.9-201ENST00000624961 1746 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
CX3CL1P78423 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CX3CL1P78423 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CX3CL1P78423 AC004817.3-201ENST00000602957 2129 ntBASIC13.75□□□□□ -0.21
CX3CL1P78423 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CX3CL1P78423 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CX3CL1P78423 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CX3CL1P78423 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.74□□□□□ -0.21
CX3CL1P78423 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CX3CL1P78423 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 PRYP5-201ENST00000451909 266 ntBASIC13.74□□□□□ -0.21
CX3CL1P78423 BX005266.1-201ENST00000473402 457 ntBASIC13.74□□□□□ -0.21
CX3CL1P78423 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.74□□□□□ -0.21
CX3CL1P78423 NKAPP1-205ENST00000585790 367 ntBASIC13.74□□□□□ -0.21
CX3CL1P78423 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 AL139288.1-201ENST00000623748 933 ntBASIC13.74□□□□□ -0.21
CX3CL1P78423 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
CX3CL1P78423 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CX3CL1P78423 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CX3CL1P78423 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CX3CL1P78423 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CX3CL1P78423 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.73□□□□□ -0.21
CX3CL1P78423 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.73□□□□□ -0.21
CX3CL1P78423 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.73□□□□□ -0.21
CX3CL1P78423 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 AC097637.2-201ENST00000624096 1997 ntBASIC13.73□□□□□ -0.21
CX3CL1P78423 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 AKR1C7P-201ENST00000305623 895 ntBASIC13.73□□□□□ -0.21
CX3CL1P78423 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CL1P78423 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CX3CL1P78423 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CX3CL1P78423 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
CX3CL1P78423 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.73□□□□□ -0.21
CX3CL1P78423 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CX3CL1P78423 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.73□□□□□ -0.21
CX3CL1P78423 AF238378.1-201ENST00000526806 358 ntBASIC13.73□□□□□ -0.21
CX3CL1P78423 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms