Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA4P78363 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA4P78363 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA4P78363 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA4P78363 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ABCA4P78363 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA4P78363 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA4P78363 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA4P78363 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCA4P78363 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ABCA4P78363 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
ABCA4P78363 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCA4P78363 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ABCA4P78363 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCA4P78363 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA4P78363 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.59□□□□□ -0.07
ABCA4P78363 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 RARRES2P8-201ENST00000566335 367 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA4P78363 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.59□□□□□ -0.07
ABCA4P78363 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
ABCA4P78363 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 GNAS-203ENST00000306120 1878 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA4P78363 CNN2P2-201ENST00000443536 909 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 CNN2P3-201ENST00000450201 906 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCA4P78363 AP005018.1-201ENST00000525475 301 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 AL136317.3-201ENST00000618497 906 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA4P78363 AC084121.4-201ENST00000641598 221 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 AF228730.8-201ENST00000642140 221 ntBASIC14.59□□□□□ -0.07
ABCA4P78363 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCA4P78363 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCA4P78363 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCA4P78363 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCA4P78363 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCA4P78363 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA4P78363 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA4P78363 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
ABCA4P78363 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 BICD1-207ENST00000551848 1962 ntBASIC14.58□□□□□ -0.08
ABCA4P78363 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.58□□□□□ -0.08
ABCA4P78363 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.58□□□□□ -0.08
ABCA4P78363 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA4P78363 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA4P78363 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ABCA4P78363 AC010336.2-201ENST00000564226 506 ntBASIC14.58□□□□□ -0.08
ABCA4P78363 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCA4P78363 AL139327.4-201ENST00000612362 153 ntBASIC14.58□□□□□ -0.08
ABCA4P78363 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCA4P78363 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
ABCA4P78363 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ABCA4P78363 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms