Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AL031284.1-201ENST00000419297 478 ntBASIC17.18■□□□□ 0.34
WNT3AP56704 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.18■□□□□ 0.34
WNT3AP56704 AL049840.3-201ENST00000602669 611 ntBASIC17.18■□□□□ 0.34
WNT3AP56704 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.18■□□□□ 0.34
WNT3AP56704 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 KRT8P49-201ENST00000604166 1432 ntBASIC17.18■□□□□ 0.34
WNT3AP56704 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.18■□□□□ 0.34
WNT3AP56704 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
WNT3AP56704 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.18■□□□□ 0.34
WNT3AP56704 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
WNT3AP56704 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 AC002310.6-201ENST00000624451 1377 ntBASIC17.17■□□□□ 0.34
WNT3AP56704 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 AL645728.1-201ENST00000366221 2101 ntBASIC17.17■□□□□ 0.34
WNT3AP56704 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
WNT3AP56704 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.17■□□□□ 0.34
WNT3AP56704 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.17■□□□□ 0.34
WNT3AP56704 AC008667.4-201ENST00000607370 168 ntBASIC17.17■□□□□ 0.34
WNT3AP56704 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
WNT3AP56704 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
WNT3AP56704 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.17■□□□□ 0.34
WNT3AP56704 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
WNT3AP56704 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.16■□□□□ 0.34
WNT3AP56704 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
WNT3AP56704 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 AC009078.2-202ENST00000463353 338 ntBASIC17.16■□□□□ 0.34
WNT3AP56704 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 SLC25A6P2-201ENST00000497974 877 ntBASIC17.16■□□□□ 0.34
WNT3AP56704 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
WNT3AP56704 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.16■□□□□ 0.34
WNT3AP56704 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.16■□□□□ 0.34
WNT3AP56704 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 MIR7706-201ENST00000613747 67 ntBASIC17.16■□□□□ 0.34
WNT3AP56704 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.16■□□□□ 0.34
WNT3AP56704 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.16■□□□□ 0.34
WNT3AP56704 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
WNT3AP56704 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
WNT3AP56704 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
WNT3AP56704 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
WNT3AP56704 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
WNT3AP56704 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 AC099398.1-201ENST00000567919 2776 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
WNT3AP56704 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms