Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH13P55290 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH13P55290 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH13P55290 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH13P55290 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDH13P55290 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 POM121L3P-201ENST00000419331 1163 ntBASIC16.66■□□□□ 0.26
CDH13P55290 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.66■□□□□ 0.26
CDH13P55290 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH13P55290 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH13P55290 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 AC092329.2-201ENST00000598402 547 ntBASIC16.66■□□□□ 0.26
CDH13P55290 AC099336.1-202ENST00000602961 463 ntBASIC16.66■□□□□ 0.26
CDH13P55290 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH13P55290 NPAP1P7-201ENST00000613027 823 ntBASIC16.66■□□□□ 0.26
CDH13P55290 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 AL358472.4-201ENST00000633140 710 ntBASIC16.66■□□□□ 0.26
CDH13P55290 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 AC006449.5-201ENST00000610658 2098 ntBASIC16.66■□□□□ 0.26
CDH13P55290 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH13P55290 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH13P55290 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH13P55290 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 AC092364.2-201ENST00000596710 2692 ntBASIC16.65■□□□□ 0.26
CDH13P55290 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH13P55290 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDH13P55290 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDH13P55290 AC092119.3-201ENST00000612618 583 ntBASIC16.65■□□□□ 0.26
CDH13P55290 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH13P55290 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH13P55290 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH13P55290 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CDH13P55290 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH13P55290 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH13P55290 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH13P55290 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CDH13P55290 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDH13P55290 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH13P55290 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms