Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.22■□□□□ 0.51
VCPP55072 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.22■□□□□ 0.51
VCPP55072 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VCPP55072 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.22■□□□□ 0.51
VCPP55072 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.22■□□□□ 0.51
VCPP55072 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.22■□□□□ 0.51
VCPP55072 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCPP55072 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VCPP55072 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 AC099398.1-201ENST00000567919 2776 ntBASIC18.21■□□□□ 0.51
VCPP55072 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.21■□□□□ 0.51
VCPP55072 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.21■□□□□ 0.51
VCPP55072 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.21■□□□□ 0.51
VCPP55072 AC136632.2-201ENST00000512891 861 ntBASIC18.21■□□□□ 0.51
VCPP55072 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.21■□□□□ 0.51
VCPP55072 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 AC004449.1-201ENST00000564240 433 ntBASIC18.21■□□□□ 0.51
VCPP55072 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.21■□□□□ 0.51
VCPP55072 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.21■□□□□ 0.51
VCPP55072 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 AC016396.2-201ENST00000562575 1417 ntBASIC18.21■□□□□ 0.51
VCPP55072 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.21■□□□□ 0.51
VCPP55072 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.21■□□□□ 0.51
VCPP55072 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 PMPCAP1-201ENST00000508114 1576 ntBASIC18.21■□□□□ 0.51
VCPP55072 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCPP55072 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
VCPP55072 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.21■□□□□ 0.5
VCPP55072 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.2■□□□□ 0.5
VCPP55072 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.2■□□□□ 0.5
VCPP55072 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.2■□□□□ 0.5
VCPP55072 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.2■□□□□ 0.5
VCPP55072 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.2■□□□□ 0.5
VCPP55072 CRYGEP-201ENST00000412192 528 ntBASIC18.2■□□□□ 0.5
VCPP55072 AC015922.1-201ENST00000421102 1152 ntBASIC18.2■□□□□ 0.5
VCPP55072 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.2■□□□□ 0.5
VCPP55072 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.2■□□□□ 0.5
VCPP55072 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.2■□□□□ 0.5
VCPP55072 AC069262.1-201ENST00000539058 672 ntBASIC18.2■□□□□ 0.5
VCPP55072 AD001527.2-201ENST00000622994 785 ntBASIC18.2■□□□□ 0.5
VCPP55072 AL022326.1-202ENST00000641533 845 ntBASIC18.2■□□□□ 0.5
VCPP55072 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.2■□□□□ 0.5
VCPP55072 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
VCPP55072 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCPP55072 AC063926.2-201ENST00000623766 1308 ntBASIC18.2■□□□□ 0.5
VCPP55072 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.2■□□□□ 0.5
VCPP55072 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VCPP55072 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
VCPP55072 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VCPP55072 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.19■□□□□ 0.5
VCPP55072 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VCPP55072 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.19■□□□□ 0.5
VCPP55072 AC007274.1-201ENST00000439805 662 ntBASIC18.19■□□□□ 0.5
VCPP55072 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.19■□□□□ 0.5
VCPP55072 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.19■□□□□ 0.5
VCPP55072 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms