Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
EPHA4P54764 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHA4P54764 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHA4P54764 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
EPHA4P54764 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHA4P54764 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHA4P54764 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHA4P54764 AC109635.5-201ENST00000533593 962 ntBASIC16.32■□□□□ 0.2
EPHA4P54764 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHA4P54764 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EPHA4P54764 AC099398.1-201ENST00000567919 2776 ntBASIC16.32■□□□□ 0.2
EPHA4P54764 AC022145.2-201ENST00000598203 171 ntBASIC16.32■□□□□ 0.2
EPHA4P54764 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHA4P54764 AC026120.1-201ENST00000611536 926 ntBASIC16.32■□□□□ 0.2
EPHA4P54764 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHA4P54764 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHA4P54764 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EPHA4P54764 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
EPHA4P54764 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 AKAP8P1-201ENST00000434743 1349 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 AC004461.1-201ENST00000412461 403 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 AL671277.1-201ENST00000429656 993 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.31■□□□□ 0.2
EPHA4P54764 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
EPHA4P54764 DUX4L17-201ENST00000557360 1267 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 AC087641.1-201ENST00000557561 1021 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 MIR3909-201ENST00000579518 119 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.31■□□□□ 0.2
EPHA4P54764 AC027612.4-201ENST00000605371 583 ntBASIC16.31■□□□□ 0.2
EPHA4P54764 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
EPHA4P54764 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA4P54764 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA4P54764 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA4P54764 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHA4P54764 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EPHA4P54764 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHA4P54764 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 FRMD8P1-201ENST00000440433 1524 ntBASIC16.3■□□□□ 0.2
EPHA4P54764 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 KRT8P49-201ENST00000604166 1432 ntBASIC16.3■□□□□ 0.2
EPHA4P54764 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
EPHA4P54764 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EPHA4P54764 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms