Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 LINC01006-201ENST00000333319 2292 ntBASIC16.9■□□□□ 0.3
NUBP1P53384 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.9■□□□□ 0.3
NUBP1P53384 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUBP1P53384 AC020907.1-201ENST00000616460 1350 ntBASIC16.89■□□□□ 0.3
NUBP1P53384 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.89■□□□□ 0.3
NUBP1P53384 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.89■□□□□ 0.29
NUBP1P53384 AC046185.3-201ENST00000623228 1824 ntBASIC16.89■□□□□ 0.29
NUBP1P53384 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NUBP1P53384 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.89■□□□□ 0.29
NUBP1P53384 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 MED20-203ENST00000409060 815 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
NUBP1P53384 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.89■□□□□ 0.29
NUBP1P53384 TRIM60P13-201ENST00000432350 1283 ntBASIC16.89■□□□□ 0.29
NUBP1P53384 NUCKS1P1-201ENST00000452067 703 ntBASIC16.89■□□□□ 0.29
NUBP1P53384 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 AC016550.3-201ENST00000515706 767 ntBASIC16.89■□□□□ 0.29
NUBP1P53384 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NUBP1P53384 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.89■□□□□ 0.29
NUBP1P53384 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.89■□□□□ 0.29
NUBP1P53384 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC16.89■□□□□ 0.29
NUBP1P53384 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.89■□□□□ 0.29
NUBP1P53384 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NUBP1P53384 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
NUBP1P53384 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.89■□□□□ 0.29
NUBP1P53384 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUBP1P53384 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NUBP1P53384 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
NUBP1P53384 AC026471.1-201ENST00000564629 3026 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NUBP1P53384 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.88■□□□□ 0.29
NUBP1P53384 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 HLA-H-201ENST00000383620 1096 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.88■□□□□ 0.29
NUBP1P53384 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
NUBP1P53384 FAM204CP-201ENST00000424489 642 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.88■□□□□ 0.29
NUBP1P53384 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.88■□□□□ 0.29
NUBP1P53384 AC007389.4-201ENST00000454674 793 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AC090568.1-201ENST00000509499 856 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AC055876.2-201ENST00000531834 546 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 MIR4538-201ENST00000581377 78 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
NUBP1P53384 CHCHD2P3-201ENST00000603038 451 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AL589739.1-201ENST00000607720 493 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
NUBP1P53384 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.88■□□□□ 0.29
NUBP1P53384 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUBP1P53384 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
NUBP1P53384 SLC7A15P-201ENST00000424028 1363 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 AC090774.4-201ENST00000578888 1372 ntBASIC16.88■□□□□ 0.29
NUBP1P53384 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.88■□□□□ 0.29
NUBP1P53384 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUBP1P53384 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUBP1P53384 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NUBP1P53384 AC009949.1-201ENST00000623048 1830 ntBASIC16.87■□□□□ 0.29
NUBP1P53384 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.87■□□□□ 0.29
NUBP1P53384 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUBP1P53384 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.87■□□□□ 0.29
NUBP1P53384 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.87■□□□□ 0.29
NUBP1P53384 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.87■□□□□ 0.29
NUBP1P53384 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUBP1P53384 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms