Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.73□□□□□ -0.05
HCFC1P51610 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.73□□□□□ -0.05
HCFC1P51610 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 AC027307.2-201ENST00000591252 911 ntBASIC14.73□□□□□ -0.05
HCFC1P51610 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 AL353732.1-201ENST00000569618 1459 ntBASIC14.73□□□□□ -0.05
HCFC1P51610 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 SLC25A1P3-201ENST00000395415 828 ntBASIC14.73□□□□□ -0.05
HCFC1P51610 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.73□□□□□ -0.05
HCFC1P51610 RN7SL692P-201ENST00000464677 288 ntBASIC14.73□□□□□ -0.05
HCFC1P51610 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.73□□□□□ -0.05
HCFC1P51610 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HCFC1P51610 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCFC1P51610 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.73□□□□□ -0.05
HCFC1P51610 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.72□□□□□ -0.05
HCFC1P51610 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.72□□□□□ -0.05
HCFC1P51610 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.72□□□□□ -0.05
HCFC1P51610 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
HCFC1P51610 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HCFC1P51610 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 HCG4-201ENST00000418983 998 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.72□□□□□ -0.05
HCFC1P51610 AC241585.1-201ENST00000433527 519 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 SLC25A6P5-201ENST00000435663 894 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 AP005018.1-201ENST00000525475 301 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.72□□□□□ -0.05
HCFC1P51610 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 MIR4453-201ENST00000584019 89 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.72□□□□□ -0.05
HCFC1P51610 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.72□□□□□ -0.05
HCFC1P51610 AC008267.7-201ENST00000624570 1194 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.72□□□□□ -0.05
HCFC1P51610 SLC22A20-204ENST00000530038 1673 ntBASIC14.72□□□□□ -0.05
HCFC1P51610 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.72□□□□□ -0.05
HCFC1P51610 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HCFC1P51610 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCFC1P51610 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.71□□□□□ -0.05
HCFC1P51610 BASP1P1-201ENST00000430708 665 ntBASIC14.71□□□□□ -0.05
HCFC1P51610 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.71□□□□□ -0.05
HCFC1P51610 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.71□□□□□ -0.05
HCFC1P51610 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 LINC00896-202ENST00000609602 2128 ntBASIC14.71□□□□□ -0.05
HCFC1P51610 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
HCFC1P51610 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms