Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.92■□□□□ 0.62
CENPFP49454 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CENPFP49454 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CENPFP49454 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.92■□□□□ 0.62
CENPFP49454 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 AC073439.1-201ENST00000624121 1774 ntBASIC18.92■□□□□ 0.62
CENPFP49454 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CENPFP49454 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.92■□□□□ 0.62
CENPFP49454 AL671710.1-201ENST00000610245 2349 ntBASIC18.91■□□□□ 0.62
CENPFP49454 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 AC234783.1-201ENST00000441761 496 ntBASIC18.91■□□□□ 0.62
CENPFP49454 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.91■□□□□ 0.62
CENPFP49454 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.91■□□□□ 0.62
CENPFP49454 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CENPFP49454 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CENPFP49454 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CENPFP49454 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CENPFP49454 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CENPFP49454 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CENPFP49454 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CENPFP49454 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.91■□□□□ 0.62
CENPFP49454 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CENPFP49454 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.91■□□□□ 0.62
CENPFP49454 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.91■□□□□ 0.62
CENPFP49454 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.91■□□□□ 0.62
CENPFP49454 MIR6869-201ENST00000619434 62 ntBASIC18.91■□□□□ 0.62
CENPFP49454 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPFP49454 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.9■□□□□ 0.62
CENPFP49454 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.9■□□□□ 0.62
CENPFP49454 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.9■□□□□ 0.62
CENPFP49454 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.9■□□□□ 0.62
CENPFP49454 AP005482.1-201ENST00000563722 1273 ntBASIC18.9■□□□□ 0.62
CENPFP49454 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.9■□□□□ 0.62
CENPFP49454 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.9■□□□□ 0.62
CENPFP49454 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CENPFP49454 TUBB1P2-201ENST00000422712 1306 ntBASIC18.9■□□□□ 0.62
CENPFP49454 TUBB1P1-201ENST00000503144 1300 ntBASIC18.9■□□□□ 0.62
CENPFP49454 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.9■□□□□ 0.62
CENPFP49454 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CENPFP49454 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CENPFP49454 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CENPFP49454 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.89■□□□□ 0.62
CENPFP49454 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CENPFP49454 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.89■□□□□ 0.62
CENPFP49454 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CENPFP49454 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.89■□□□□ 0.62
CENPFP49454 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CENPFP49454 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms