Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 RNU1-129P-201ENST00000384064 167 ntBASIC16.97■□□□□ 0.31
CSNK1DP48730 PMS2P4-201ENST00000412466 1052 ntBASIC16.97■□□□□ 0.31
CSNK1DP48730 MKNK2P1-201ENST00000437526 628 ntBASIC16.97■□□□□ 0.31
CSNK1DP48730 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.97■□□□□ 0.31
CSNK1DP48730 AC109635.5-201ENST00000533593 962 ntBASIC16.97■□□□□ 0.31
CSNK1DP48730 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 U1.21-201ENST00000580816 167 ntBASIC16.97■□□□□ 0.31
CSNK1DP48730 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CSNK1DP48730 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1DP48730 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1DP48730 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1DP48730 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1DP48730 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 AL645728.1-201ENST00000366221 2101 ntBASIC16.96■□□□□ 0.31
CSNK1DP48730 AC105020.1-201ENST00000435356 2205 ntBASIC16.96■□□□□ 0.31
CSNK1DP48730 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1DP48730 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.96■□□□□ 0.31
CSNK1DP48730 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 AC002056.1-201ENST00000395613 760 ntBASIC16.96■□□□□ 0.31
CSNK1DP48730 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CSNK1DP48730 UPF3AP3-201ENST00000420996 769 ntBASIC16.96■□□□□ 0.31
CSNK1DP48730 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1DP48730 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1DP48730 AC023511.2-201ENST00000618803 211 ntBASIC16.96■□□□□ 0.31
CSNK1DP48730 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1DP48730 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CSNK1DP48730 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CSNK1DP48730 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1DP48730 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CSNK1DP48730 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CSNK1DP48730 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.96■□□□□ 0.3
CSNK1DP48730 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1DP48730 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 RPSAP43-201ENST00000402237 625 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 ACTG1P14-201ENST00000446382 1122 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1DP48730 AC112191.1-201ENST00000523689 701 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 MIR3687-2-201ENST00000577708 61 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1DP48730 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 AL009183.1-201ENST00000603760 355 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 MIR3687-1-201ENST00000614492 61 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CSNK1DP48730 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1DP48730 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CSNK1DP48730 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CSNK1DP48730 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CSNK1DP48730 KRT8P39-201ENST00000396270 1433 ntBASIC16.95■□□□□ 0.3
CSNK1DP48730 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms