Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 ABCD1P5-201ENST00000445663 754 ntBASIC17.95■□□□□ 0.46
CHRNA3P32297 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 AC122714.2-201ENST00000502787 707 ntBASIC17.95■□□□□ 0.46
CHRNA3P32297 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.95■□□□□ 0.46
CHRNA3P32297 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.95■□□□□ 0.46
CHRNA3P32297 MTDHP3-201ENST00000594186 672 ntBASIC17.95■□□□□ 0.46
CHRNA3P32297 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CHRNA3P32297 AL355877.3-201ENST00000622820 899 ntBASIC17.95■□□□□ 0.46
CHRNA3P32297 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRNA3P32297 TP73-AS1-207ENST00000624167 988 ntBASIC17.95■□□□□ 0.46
CHRNA3P32297 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRNA3P32297 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRNA3P32297 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRNA3P32297 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHRNA3P32297 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHRNA3P32297 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 AC006449.5-201ENST00000610658 2098 ntBASIC17.94■□□□□ 0.46
CHRNA3P32297 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRNA3P32297 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 SLC25A6P4-201ENST00000586535 553 ntBASIC17.94■□□□□ 0.46
CHRNA3P32297 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
CHRNA3P32297 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRNA3P32297 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRNA3P32297 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRNA3P32297 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 AL049757.1-201ENST00000616842 1596 ntBASIC17.93■□□□□ 0.46
CHRNA3P32297 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AP005117.1-201ENST00000584346 1413 ntBASIC17.93■□□□□ 0.46
CHRNA3P32297 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 MRPL3P1-201ENST00000400109 1033 ntBASIC17.93■□□□□ 0.46
CHRNA3P32297 AC103564.2-201ENST00000432853 1299 ntBASIC17.93■□□□□ 0.46
CHRNA3P32297 FAM197Y8-203ENST00000450145 560 ntBASIC17.93■□□□□ 0.46
CHRNA3P32297 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.93■□□□□ 0.46
CHRNA3P32297 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AL662844.1-201ENST00000546340 181 ntBASIC17.93■□□□□ 0.46
CHRNA3P32297 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.93■□□□□ 0.46
CHRNA3P32297 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CHRNA3P32297 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRNA3P32297 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CHRNA3P32297 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRNA3P32297 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA3P32297 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHRNA3P32297 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA3P32297 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms