Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF1P30408 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TM4SF1P30408 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TM4SF1P30408 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TM4SF1P30408 AC093525.9-201ENST00000624961 1746 ntBASIC20.88■□□□□ 0.93
TM4SF1P30408 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF1P30408 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.88■□□□□ 0.93
TM4SF1P30408 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.88■□□□□ 0.93
TM4SF1P30408 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF1P30408 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.88■□□□□ 0.93
TM4SF1P30408 AC135586.1-201ENST00000539323 574 ntBASIC20.88■□□□□ 0.93
TM4SF1P30408 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TM4SF1P30408 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF1P30408 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 AC132938.2-201ENST00000579188 680 ntBASIC20.88■□□□□ 0.93
TM4SF1P30408 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 AL591163.1-201ENST00000641757 987 ntBASIC20.88■□□□□ 0.93
TM4SF1P30408 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF1P30408 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.88■□□□□ 0.93
TM4SF1P30408 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 BTBD7P1-201ENST00000447253 1453 ntBASIC20.88■□□□□ 0.93
TM4SF1P30408 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.87■□□□□ 0.93
TM4SF1P30408 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 AL080243.2-201ENST00000418783 582 ntBASIC20.87■□□□□ 0.93
TM4SF1P30408 AL079307.3-201ENST00000556114 283 ntBASIC20.87■□□□□ 0.93
TM4SF1P30408 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.87■□□□□ 0.93
TM4SF1P30408 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.87■□□□□ 0.93
TM4SF1P30408 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TM4SF1P30408 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.87■□□□□ 0.93
TM4SF1P30408 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
TM4SF1P30408 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF1P30408 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TM4SF1P30408 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.86■□□□□ 0.93
TM4SF1P30408 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TM4SF1P30408 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.86■□□□□ 0.93
TM4SF1P30408 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.86■□□□□ 0.93
TM4SF1P30408 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.86■□□□□ 0.93
TM4SF1P30408 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.86■□□□□ 0.93
TM4SF1P30408 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.86■□□□□ 0.93
TM4SF1P30408 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 AC073439.1-201ENST00000624121 1774 ntBASIC20.86■□□□□ 0.93
TM4SF1P30408 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM4SF1P30408 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.86■□□□□ 0.93
TM4SF1P30408 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TM4SF1P30408 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TM4SF1P30408 AL391825.1-201ENST00000457671 1364 ntBASIC20.85■□□□□ 0.93
TM4SF1P30408 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
TM4SF1P30408 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TM4SF1P30408 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF1P30408 AL512384.1-201ENST00000406683 331 ntBASIC20.85■□□□□ 0.93
TM4SF1P30408 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TM4SF1P30408 RPS2P32-201ENST00000439199 892 ntBASIC20.85■□□□□ 0.93
TM4SF1P30408 ACA64.2-201ENST00000459014 129 ntBASIC20.85■□□□□ 0.93
TM4SF1P30408 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF1P30408 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 AC017083.2-201ENST00000608069 979 ntBASIC20.85■□□□□ 0.93
TM4SF1P30408 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.85■□□□□ 0.93
TM4SF1P30408 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM4SF1P30408 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.85■□□□□ 0.93
TM4SF1P30408 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms