Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.44■□□□□ 0.38
RBL1P28749 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.44■□□□□ 0.38
RBL1P28749 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.44■□□□□ 0.38
RBL1P28749 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.44■□□□□ 0.38
RBL1P28749 AP002490.2-201ENST00000524791 560 ntBASIC17.44■□□□□ 0.38
RBL1P28749 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RBL1P28749 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RBL1P28749 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RBL1P28749 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RBL1P28749 HLA-A-202ENST00000376806 1854 ntBASIC17.44■□□□□ 0.38
RBL1P28749 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBL1P28749 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
RBL1P28749 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 AL021920.2-201ENST00000624828 1351 ntBASIC17.43■□□□□ 0.38
RBL1P28749 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.43■□□□□ 0.38
RBL1P28749 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RBL1P28749 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 AF238378.1-201ENST00000526806 358 ntBASIC17.43■□□□□ 0.38
RBL1P28749 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.43■□□□□ 0.38
RBL1P28749 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.43■□□□□ 0.38
RBL1P28749 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.43■□□□□ 0.38
RBL1P28749 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 CLEC4GP1-201ENST00000596555 870 ntBASIC17.43■□□□□ 0.38
RBL1P28749 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RBL1P28749 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
RBL1P28749 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
RBL1P28749 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RBL1P28749 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.43■□□□□ 0.38
RBL1P28749 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBL1P28749 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBL1P28749 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RBL1P28749 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RBL1P28749 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBL1P28749 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBL1P28749 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.42■□□□□ 0.38
RBL1P28749 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RBL1P28749 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.42■□□□□ 0.38
RBL1P28749 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.42■□□□□ 0.38
RBL1P28749 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.42■□□□□ 0.38
RBL1P28749 AC139887.3-201ENST00000568585 713 ntBASIC17.42■□□□□ 0.38
RBL1P28749 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.42■□□□□ 0.38
RBL1P28749 AC004706.3-202ENST00000621574 984 ntBASIC17.42■□□□□ 0.38
RBL1P28749 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBL1P28749 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBL1P28749 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBL1P28749 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.42■□□□□ 0.38
RBL1P28749 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RBL1P28749 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RBL1P28749 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms