Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RXRBP28702 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.9■■□□□ 1.1
RXRBP28702 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.9■■□□□ 1.1
RXRBP28702 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.9■■□□□ 1.1
RXRBP28702 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 AC131009.4-201ENST00000624048 1740 ntBASIC21.9■■□□□ 1.1
RXRBP28702 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.9■■□□□ 1.1
RXRBP28702 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.9■■□□□ 1.1
RXRBP28702 AL162726.2-201ENST00000438986 1017 ntBASIC21.9■■□□□ 1.1
RXRBP28702 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC21.9■■□□□ 1.1
RXRBP28702 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.9■■□□□ 1.1
RXRBP28702 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.9■■□□□ 1.1
RXRBP28702 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
RXRBP28702 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.9■■□□□ 1.1
RXRBP28702 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RXRBP28702 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.89■■□□□ 1.1
RXRBP28702 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.89■■□□□ 1.1
RXRBP28702 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
RXRBP28702 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.89■■□□□ 1.1
RXRBP28702 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.89■■□□□ 1.1
RXRBP28702 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RXRBP28702 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RXRBP28702 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RXRBP28702 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RXRBP28702 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.89■■□□□ 1.1
RXRBP28702 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.89■■□□□ 1.09
RXRBP28702 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC21.89■■□□□ 1.09
RXRBP28702 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.89■■□□□ 1.09
RXRBP28702 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 AC104306.2-201ENST00000451877 341 ntBASIC21.89■■□□□ 1.09
RXRBP28702 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC21.89■■□□□ 1.09
RXRBP28702 AC079316.1-201ENST00000548397 411 ntBASIC21.89■■□□□ 1.09
RXRBP28702 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.89■■□□□ 1.09
RXRBP28702 MIR4492-201ENST00000581627 80 ntBASIC21.89■■□□□ 1.09
RXRBP28702 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC21.89■■□□□ 1.09
RXRBP28702 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RXRBP28702 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.89■■□□□ 1.09
RXRBP28702 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
RXRBP28702 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.88■■□□□ 1.09
RXRBP28702 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC21.88■■□□□ 1.09
RXRBP28702 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 AC092978.1-202ENST00000637590 1327 ntBASIC21.88■■□□□ 1.09
RXRBP28702 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.88■■□□□ 1.09
RXRBP28702 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.88■■□□□ 1.09
RXRBP28702 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.88■■□□□ 1.09
RXRBP28702 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.88■■□□□ 1.09
RXRBP28702 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.88■■□□□ 1.09
RXRBP28702 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.88■■□□□ 1.09
RXRBP28702 CU634019.7-201ENST00000624153 1185 ntBASIC21.88■■□□□ 1.09
RXRBP28702 FP236241.2-201ENST00000624906 1185 ntBASIC21.88■■□□□ 1.09
RXRBP28702 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.88■■□□□ 1.09
RXRBP28702 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RXRBP28702 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
RXRBP28702 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RXRBP28702 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RXRBP28702 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
RXRBP28702 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RXRBP28702 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RXRBP28702 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
RXRBP28702 AC073439.1-201ENST00000624121 1774 ntBASIC21.87■■□□□ 1.09
RXRBP28702 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms