Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHMLP26374 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMLP26374 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
CHMLP26374 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHMLP26374 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMLP26374 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMLP26374 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CHMLP26374 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMLP26374 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 KRT18P67-201ENST00000432816 1264 ntBASIC20.46■□□□□ 0.87
CHMLP26374 AC136632.2-201ENST00000512891 861 ntBASIC20.46■□□□□ 0.87
CHMLP26374 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHMLP26374 AC107918.2-201ENST00000530817 355 ntBASIC20.46■□□□□ 0.87
CHMLP26374 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.46■□□□□ 0.87
CHMLP26374 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 MIR4492-201ENST00000581627 80 ntBASIC20.46■□□□□ 0.87
CHMLP26374 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMLP26374 AL031008.1-201ENST00000619963 541 ntBASIC20.46■□□□□ 0.87
CHMLP26374 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.46■□□□□ 0.87
CHMLP26374 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMLP26374 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHMLP26374 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMLP26374 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CHMLP26374 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMLP26374 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHMLP26374 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMLP26374 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMLP26374 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMLP26374 AP002414.3-201ENST00000589352 1468 ntBASIC20.45■□□□□ 0.86
CHMLP26374 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHMLP26374 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMLP26374 AL450487.1-201ENST00000426799 995 ntBASIC20.45■□□□□ 0.86
CHMLP26374 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMLP26374 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHMLP26374 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMLP26374 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMLP26374 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMLP26374 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHMLP26374 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMLP26374 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
CHMLP26374 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMLP26374 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CHMLP26374 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMLP26374 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 AC138932.1-201ENST00000534164 6830 ntBASIC20.44■□□□□ 0.86
CHMLP26374 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 AC006538.1-201ENST00000567905 1585 ntBASIC20.44■□□□□ 0.86
CHMLP26374 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHMLP26374 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.44■□□□□ 0.86
CHMLP26374 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.44■□□□□ 0.86
CHMLP26374 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMLP26374 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.44■□□□□ 0.86
CHMLP26374 AC105339.3-201ENST00000560043 636 ntBASIC20.44■□□□□ 0.86
CHMLP26374 MPDU1-223ENST00000582151 728 ntBASIC20.44■□□□□ 0.86
CHMLP26374 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHMLP26374 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMLP26374 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMLP26374 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMLP26374 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMLP26374 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMLP26374 TNRC18P3-201ENST00000441896 2691 ntBASIC20.43■□□□□ 0.86
CHMLP26374 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMLP26374 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms