Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.41□□□□□ -0.1
VAMP1P23763 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.41□□□□□ -0.1
VAMP1P23763 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VAMP1P23763 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 PVRIG2P-201ENST00000435460 978 ntBASIC14.41□□□□□ -0.1
VAMP1P23763 RPPH1-201ENST00000516869 333 ntBASIC14.41□□□□□ -0.1
VAMP1P23763 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 AP005242.2-201ENST00000580065 1175 ntBASIC14.41□□□□□ -0.1
VAMP1P23763 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VAMP1P23763 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.41□□□□□ -0.1
VAMP1P23763 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 SBF1P1-201ENST00000444527 5631 ntBASIC14.4□□□□□ -0.1
VAMP1P23763 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VAMP1P23763 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
VAMP1P23763 FAM197Y4-202ENST00000622692 608 ntBASIC14.4□□□□□ -0.1
VAMP1P23763 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
VAMP1P23763 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 AC005052.1-201ENST00000625181 2492 ntBASIC14.4□□□□□ -0.1
VAMP1P23763 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.4□□□□□ -0.1
VAMP1P23763 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 AL136379.1-201ENST00000623471 2642 ntBASIC14.4□□□□□ -0.1
VAMP1P23763 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VAMP1P23763 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAMP1P23763 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.4□□□□□ -0.1
VAMP1P23763 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
VAMP1P23763 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.39□□□□□ -0.11
VAMP1P23763 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.39□□□□□ -0.11
VAMP1P23763 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
VAMP1P23763 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
VAMP1P23763 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VAMP1P23763 AC128676.1-201ENST00000454392 318 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms