Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VCLP18206 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.16■□□□□ 0.34
VCLP18206 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VCLP18206 BX005266.1-201ENST00000473402 457 ntBASIC17.16■□□□□ 0.34
VCLP18206 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.16■□□□□ 0.34
VCLP18206 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.16■□□□□ 0.34
VCLP18206 AC021087.4-201ENST00000563761 564 ntBASIC17.16■□□□□ 0.34
VCLP18206 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.16■□□□□ 0.34
VCLP18206 MTDHP4-201ENST00000600287 670 ntBASIC17.16■□□□□ 0.34
VCLP18206 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VCLP18206 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
VCLP18206 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
VCLP18206 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.16■□□□□ 0.34
VCLP18206 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VCLP18206 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
VCLP18206 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VCLP18206 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.15■□□□□ 0.34
VCLP18206 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 FDX1P1-201ENST00000449115 551 ntBASIC17.15■□□□□ 0.34
VCLP18206 AC009078.2-202ENST00000463353 338 ntBASIC17.15■□□□□ 0.34
VCLP18206 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 AP001005.1-201ENST00000571755 1248 ntBASIC17.15■□□□□ 0.34
VCLP18206 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.15■□□□□ 0.34
VCLP18206 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.15■□□□□ 0.34
VCLP18206 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.15■□□□□ 0.34
VCLP18206 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VCLP18206 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
VCLP18206 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.15■□□□□ 0.34
VCLP18206 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VCLP18206 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.14■□□□□ 0.34
VCLP18206 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
VCLP18206 FLJ38576-201ENST00000623820 2459 ntBASIC17.14■□□□□ 0.34
VCLP18206 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.14■□□□□ 0.34
VCLP18206 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VCLP18206 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.14■□□□□ 0.33
VCLP18206 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 MST1L-201ENST00000442552 2185 ntBASIC17.14■□□□□ 0.33
VCLP18206 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
VCLP18206 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.14■□□□□ 0.33
VCLP18206 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 OR7E14P-202ENST00000530490 1290 ntBASIC17.14■□□□□ 0.33
VCLP18206 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VCLP18206 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 SLC25A6P4-201ENST00000586535 553 ntBASIC17.14■□□□□ 0.33
VCLP18206 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
VCLP18206 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.14■□□□□ 0.33
VCLP18206 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VCLP18206 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms