Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 AL645939.2-201ENST00000427340 991 ntBASIC13.3□□□□□ -0.28
CD28P10747 CYMP-203ENST00000474680 1263 ntBASIC13.3□□□□□ -0.28
CD28P10747 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 AP000344.2-201ENST00000512987 629 ntBASIC13.3□□□□□ -0.28
CD28P10747 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.3□□□□□ -0.28
CD28P10747 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.3□□□□□ -0.28
CD28P10747 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.3□□□□□ -0.28
CD28P10747 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.3□□□□□ -0.28
CD28P10747 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.3□□□□□ -0.28
CD28P10747 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CD28P10747 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD28P10747 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.29□□□□□ -0.28
CD28P10747 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD28P10747 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CD28P10747 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CD28P10747 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.29□□□□□ -0.28
CD28P10747 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.29□□□□□ -0.28
CD28P10747 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.29□□□□□ -0.28
CD28P10747 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.29□□□□□ -0.28
CD28P10747 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.29□□□□□ -0.28
CD28P10747 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.29□□□□□ -0.28
CD28P10747 AC129492.6-201ENST00000611383 1305 ntBASIC13.29□□□□□ -0.28
CD28P10747 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.29□□□□□ -0.28
CD28P10747 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.29□□□□□ -0.28
CD28P10747 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD28P10747 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
CD28P10747 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 AL355312.1-201ENST00000407115 2176 ntBASIC13.28□□□□□ -0.28
CD28P10747 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CD28P10747 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.28□□□□□ -0.28
CD28P10747 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.28□□□□□ -0.28
CD28P10747 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.28□□□□□ -0.28
CD28P10747 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.28□□□□□ -0.28
CD28P10747 TSEN15P1-201ENST00000423257 515 ntBASIC13.28□□□□□ -0.28
CD28P10747 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.28□□□□□ -0.28
CD28P10747 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.28□□□□□ -0.28
CD28P10747 AC112191.1-201ENST00000523689 701 ntBASIC13.28□□□□□ -0.28
CD28P10747 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.28□□□□□ -0.28
CD28P10747 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.28□□□□□ -0.28
CD28P10747 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.28□□□□□ -0.28
CD28P10747 AC004835.2-201ENST00000603762 682 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms