Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FREM3P0C091 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
FREM3P0C091 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.41■□□□□ 0.06
FREM3P0C091 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 SLC25A6P2-201ENST00000497974 877 ntBASIC15.41■□□□□ 0.06
FREM3P0C091 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
FREM3P0C091 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
FREM3P0C091 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 DNAJB3-201ENST00000446806 729 ntBASIC15.41■□□□□ 0.06
FREM3P0C091 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.41■□□□□ 0.06
FREM3P0C091 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.41■□□□□ 0.06
FREM3P0C091 AC023141.13-201ENST00000604991 943 ntBASIC15.41■□□□□ 0.06
FREM3P0C091 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 NKILA-202ENST00000614771 2598 ntBASIC15.41■□□□□ 0.06
FREM3P0C091 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FREM3P0C091 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.41■□□□□ 0.06
FREM3P0C091 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
FREM3P0C091 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.4■□□□□ 0.06
FREM3P0C091 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.4■□□□□ 0.06
FREM3P0C091 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 AC107918.2-201ENST00000530817 355 ntBASIC15.4■□□□□ 0.06
FREM3P0C091 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.4■□□□□ 0.06
FREM3P0C091 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
FREM3P0C091 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
FREM3P0C091 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.4■□□□□ 0.06
FREM3P0C091 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FREM3P0C091 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FREM3P0C091 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FREM3P0C091 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FREM3P0C091 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms