Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 AL353692.3-201ENST00000407031 1396 ntBASIC19.13■□□□□ 0.65
TPM3P06753 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM3P06753 AC099063.4-201ENST00000641099 1602 ntBASIC19.13■□□□□ 0.65
TPM3P06753 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
TPM3P06753 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPM3P06753 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.13■□□□□ 0.65
TPM3P06753 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC19.13■□□□□ 0.65
TPM3P06753 AC126755.1-201ENST00000525846 6405 ntBASIC19.13■□□□□ 0.65
TPM3P06753 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 AC092384.3-202ENST00000564646 2873 ntBASIC19.12■□□□□ 0.65
TPM3P06753 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TPM3P06753 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM3P06753 AC006538.1-201ENST00000567905 1585 ntBASIC19.12■□□□□ 0.65
TPM3P06753 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TPM3P06753 KRT18P22-201ENST00000402024 1347 ntBASIC19.12■□□□□ 0.65
TPM3P06753 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 AC068472.1-201ENST00000474589 881 ntBASIC19.12■□□□□ 0.65
TPM3P06753 AP003733.1-201ENST00000491725 852 ntBASIC19.12■□□□□ 0.65
TPM3P06753 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM3P06753 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.12■□□□□ 0.65
TPM3P06753 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
TPM3P06753 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.12■□□□□ 0.65
TPM3P06753 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM3P06753 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM3P06753 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TPM3P06753 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPM3P06753 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.12■□□□□ 0.65
TPM3P06753 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TPM3P06753 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.11■□□□□ 0.65
TPM3P06753 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.11■□□□□ 0.65
TPM3P06753 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 AP002490.2-201ENST00000524791 560 ntBASIC19.11■□□□□ 0.65
TPM3P06753 ZNF444P1-201ENST00000559497 298 ntBASIC19.11■□□□□ 0.65
TPM3P06753 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.11■□□□□ 0.65
TPM3P06753 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TPM3P06753 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TPM3P06753 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 AC092364.2-201ENST00000596710 2692 ntBASIC19.11■□□□□ 0.65
TPM3P06753 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TPM3P06753 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM3P06753 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.11■□□□□ 0.65
TPM3P06753 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM3P06753 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.1■□□□□ 0.65
TPM3P06753 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM3P06753 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TPM3P06753 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms