Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 AC114501.2-201ENST00000439631 535 ntBASIC19.18■□□□□ 0.66
ALDH1A1P00352 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 AC092552.1-201ENST00000547243 906 ntBASIC19.18■□□□□ 0.66
ALDH1A1P00352 BANF1P1-201ENST00000553684 263 ntBASIC19.18■□□□□ 0.66
ALDH1A1P00352 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.17■□□□□ 0.66
ALDH1A1P00352 MYCLP2-201ENST00000449268 967 ntBASIC19.17■□□□□ 0.66
ALDH1A1P00352 AC007389.4-201ENST00000454674 793 ntBASIC19.17■□□□□ 0.66
ALDH1A1P00352 SERBP1P3-201ENST00000459980 809 ntBASIC19.17■□□□□ 0.66
ALDH1A1P00352 AC119751.2-201ENST00000504529 210 ntBASIC19.17■□□□□ 0.66
ALDH1A1P00352 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A1P00352 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A1P00352 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A1P00352 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ALDH1A1P00352 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A1P00352 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
ALDH1A1P00352 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALDH1A1P00352 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALDH1A1P00352 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms