Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPNE6O95741 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE6O95741 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CPNE6O95741 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPNE6O95741 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE6O95741 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE6O95741 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CPNE6O95741 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE6O95741 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE6O95741 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE6O95741 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE6O95741 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE6O95741 AC018845.2-201ENST00000568326 409 ntBASIC16.72■□□□□ 0.27
CPNE6O95741 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CPNE6O95741 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPNE6O95741 PCDH8P1-201ENST00000428983 2773 ntBASIC16.72■□□□□ 0.27
CPNE6O95741 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE6O95741 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE6O95741 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE6O95741 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CPNE6O95741 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.71■□□□□ 0.27
CPNE6O95741 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE6O95741 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CPNE6O95741 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 DNAJB3-202ENST00000449667 1266 ntBASIC16.71■□□□□ 0.27
CPNE6O95741 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.71■□□□□ 0.27
CPNE6O95741 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE6O95741 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE6O95741 AC092865.6-201ENST00000642101 219 ntBASIC16.71■□□□□ 0.27
CPNE6O95741 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CPNE6O95741 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
CPNE6O95741 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CPNE6O95741 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE6O95741 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE6O95741 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE6O95741 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CPNE6O95741 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE6O95741 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE6O95741 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPNE6O95741 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE6O95741 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE6O95741 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPNE6O95741 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPNE6O95741 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPNE6O95741 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE6O95741 ACTG1P4-201ENST00000425123 1122 ntBASIC16.7■□□□□ 0.26
CPNE6O95741 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE6O95741 AP006288.1-201ENST00000446065 395 ntBASIC16.7■□□□□ 0.26
CPNE6O95741 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.7■□□□□ 0.26
CPNE6O95741 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CPNE6O95741 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms