Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RTN3O95197 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN3O95197 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RTN3O95197 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN3O95197 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.92■□□□□ 0.46
RTN3O95197 AC023141.13-201ENST00000604991 943 ntBASIC17.92■□□□□ 0.46
RTN3O95197 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.92■□□□□ 0.46
RTN3O95197 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN3O95197 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN3O95197 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN3O95197 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN3O95197 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 BCAR1-209ENST00000546196 1340 ntBASIC17.92■□□□□ 0.46
RTN3O95197 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN3O95197 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN3O95197 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RTN3O95197 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RTN3O95197 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 SLC25A1P3-201ENST00000395415 828 ntBASIC17.91■□□□□ 0.46
RTN3O95197 GPX1P2-201ENST00000429271 606 ntBASIC17.91■□□□□ 0.46
RTN3O95197 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.91■□□□□ 0.46
RTN3O95197 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.91■□□□□ 0.46
RTN3O95197 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.91■□□□□ 0.46
RTN3O95197 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RTN3O95197 AC092865.6-201ENST00000642101 219 ntBASIC17.91■□□□□ 0.46
RTN3O95197 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTN3O95197 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTN3O95197 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTN3O95197 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.9■□□□□ 0.46
RTN3O95197 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RTN3O95197 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.9■□□□□ 0.46
RTN3O95197 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RTN3O95197 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.9■□□□□ 0.46
RTN3O95197 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTN3O95197 RPSAP43-201ENST00000402237 625 ntBASIC17.9■□□□□ 0.46
RTN3O95197 KRT19P2-202ENST00000557173 1012 ntBASIC17.9■□□□□ 0.46
RTN3O95197 PDPK2P-202ENST00000562415 1191 ntBASIC17.9■□□□□ 0.46
RTN3O95197 AC010327.4-202ENST00000591484 748 ntBASIC17.9■□□□□ 0.46
RTN3O95197 AC139530.3-201ENST00000620344 690 ntBASIC17.9■□□□□ 0.46
RTN3O95197 AL513190.1-201ENST00000621254 727 ntBASIC17.9■□□□□ 0.46
RTN3O95197 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RTN3O95197 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RTN3O95197 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.9■□□□□ 0.46
RTN3O95197 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTN3O95197 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.89■□□□□ 0.46
RTN3O95197 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RTN3O95197 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN3O95197 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
RTN3O95197 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.89■□□□□ 0.45
RTN3O95197 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.89■□□□□ 0.45
RTN3O95197 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms