Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.11■□□□□ 0.01
ALX3O95076 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 KRT126P-201ENST00000549467 1181 ntBASIC15.11■□□□□ 0.01
ALX3O95076 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ALX3O95076 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.11■□□□□ 0.01
ALX3O95076 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
ALX3O95076 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.11■□□□□ 0.01
ALX3O95076 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.11■□□□□ 0.01
ALX3O95076 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
ALX3O95076 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ALX3O95076 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
ALX3O95076 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
ALX3O95076 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ALX3O95076 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.1■□□□□ 0.01
ALX3O95076 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
ALX3O95076 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.1■□□□□ 0.01
ALX3O95076 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.1■□□□□ 0.01
ALX3O95076 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.1■□□□□ 0.01
ALX3O95076 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ALX3O95076 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ALX3O95076 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ALX3O95076 AC026396.1-201ENST00000419388 421 ntBASIC15.1■□□□□ 0.01
ALX3O95076 AL137013.1-201ENST00000432946 1228 ntBASIC15.1■□□□□ 0.01
ALX3O95076 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.1■□□□□ 0.01
ALX3O95076 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.1■□□□□ 0.01
ALX3O95076 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.1■□□□□ 0.01
ALX3O95076 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
ALX3O95076 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.1■□□□□ 0.01
ALX3O95076 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.1■□□□□ 0.01
ALX3O95076 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.1■□□□□ 0.01
ALX3O95076 AL390719.2-201ENST00000606993 987 ntBASIC15.1■□□□□ 0.01
ALX3O95076 AC139887.4-201ENST00000607877 719 ntBASIC15.1■□□□□ 0.01
ALX3O95076 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ALX3O95076 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.1■□□□□ 0.01
ALX3O95076 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.1■□□□□ 0.01
ALX3O95076 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ALX3O95076 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.1■□□□□ 0.01
ALX3O95076 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ALX3O95076 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ALX3O95076 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 TERF1P1-201ENST00000311003 1181 ntBASIC15.09■□□□□ 0.01
ALX3O95076 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 RNF152P1-201ENST00000397754 604 ntBASIC15.09■□□□□ 0.01
ALX3O95076 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 TSPY5P-201ENST00000426936 936 ntBASIC15.09■□□□□ 0.01
ALX3O95076 AC117947.1-201ENST00000427448 529 ntBASIC15.09■□□□□ 0.01
ALX3O95076 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.09■□□□□ 0.01
ALX3O95076 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.09■□□□□ 0.01
ALX3O95076 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ALX3O95076 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 AC005332.3-201ENST00000589904 676 ntBASIC15.09■□□□□ 0.01
ALX3O95076 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ALX3O95076 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.09■□□□□ 0.01
ALX3O95076 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ALX3O95076 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ALX3O95076 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms