Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
USH2AO75445 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 UFM1-202ENST00000379649 846 ntTSL 4 BASIC7.47□□□□□ -1.21
USH2AO75445 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AC007969.1-201ENST00000433675 447 ntBASIC7.47□□□□□ -1.21
USH2AO75445 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 KRT18P34-201ENST00000488218 1270 ntBASIC7.47□□□□□ -1.21
USH2AO75445 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 RN7SL555P-201ENST00000584742 339 ntBASIC7.47□□□□□ -1.21
USH2AO75445 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC7.47□□□□□ -1.21
USH2AO75445 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 OLR1-203ENST00000432556 950 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 KRT43P-201ENST00000434019 910 ntBASIC7.47□□□□□ -1.21
USH2AO75445 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 KRT90P-201ENST00000549264 1064 ntBASIC7.47□□□□□ -1.21
USH2AO75445 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC7.47□□□□□ -1.21
USH2AO75445 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
USH2AO75445 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC7.47□□□□□ -1.21
USH2AO75445 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 PRYP6-201ENST00000514804 343 ntBASIC7.47□□□□□ -1.21
USH2AO75445 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 ANO7L1-203ENST00000602586 1720 ntBASIC7.47□□□□□ -1.21
USH2AO75445 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC7.47□□□□□ -1.21
USH2AO75445 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 FLJ13224-201ENST00000313737 1514 ntBASIC7.46□□□□□ -1.21
USH2AO75445 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC7.46□□□□□ -1.21
USH2AO75445 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.21
USH2AO75445 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC7.46□□□□□ -1.21
USH2AO75445 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC7.46□□□□□ -1.21
USH2AO75445 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC7.46□□□□□ -1.21
USH2AO75445 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC7.46□□□□□ -1.21
USH2AO75445 ABBA01031663.1-201ENST00000635630 790 ntBASIC7.46□□□□□ -1.21
USH2AO75445 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 PFN2-215ENST00000497148 743 ntTSL 4 BASIC7.46□□□□□ -1.21
USH2AO75445 FADS2-205ENST00000517839 469 ntTSL 3 BASIC7.46□□□□□ -1.21
USH2AO75445 AC068587.3-201ENST00000526613 355 ntBASIC7.46□□□□□ -1.21
USH2AO75445 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC7.46□□□□□ -1.21
USH2AO75445 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 AC097724.1-201ENST00000609581 426 ntBASIC7.46□□□□□ -1.21
USH2AO75445 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
USH2AO75445 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USH2AO75445 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms