Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 LAGE3P1-201ENST00000425356 484 ntBASIC15.92■□□□□ 0.14
TRIM3O75382 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.92■□□□□ 0.14
TRIM3O75382 AC139887.3-201ENST00000568585 713 ntBASIC15.92■□□□□ 0.14
TRIM3O75382 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM3O75382 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 BX640515.1-201ENST00000617215 977 ntBASIC15.92■□□□□ 0.14
TRIM3O75382 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRIM3O75382 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM3O75382 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
TRIM3O75382 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM3O75382 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 AC243591.1-201ENST00000452967 1364 ntBASIC15.91■□□□□ 0.14
TRIM3O75382 LINC00304-203ENST00000565008 1864 ntBASIC15.91■□□□□ 0.14
TRIM3O75382 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.91■□□□□ 0.14
TRIM3O75382 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM3O75382 AL590627.1-203ENST00000421194 1026 ntBASIC15.91■□□□□ 0.14
TRIM3O75382 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM3O75382 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM3O75382 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM3O75382 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM3O75382 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.91■□□□□ 0.14
TRIM3O75382 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TRIM3O75382 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM3O75382 AC008735.5-201ENST00000623544 497 ntBASIC15.91■□□□□ 0.14
TRIM3O75382 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.91■□□□□ 0.14
TRIM3O75382 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRIM3O75382 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TRIM3O75382 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM3O75382 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM3O75382 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM3O75382 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM3O75382 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM3O75382 AC012640.2-201ENST00000561606 901 ntBASIC15.9■□□□□ 0.14
TRIM3O75382 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM3O75382 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM3O75382 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM3O75382 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
TRIM3O75382 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM3O75382 AL589182.2-201ENST00000619332 1049 ntBASIC15.9■□□□□ 0.14
TRIM3O75382 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRIM3O75382 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM3O75382 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 IL9RP2-201ENST00000423948 1312 ntBASIC15.9■□□□□ 0.14
TRIM3O75382 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM3O75382 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms