Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCL13O43927 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCL13O43927 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCL13O43927 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CXCL13O43927 AC096734.2-201ENST00000562054 433 ntBASIC15.21■□□□□ 0.03
CXCL13O43927 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCL13O43927 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCL13O43927 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CXCL13O43927 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCL13O43927 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCL13O43927 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCL13O43927 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCL13O43927 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCL13O43927 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCL13O43927 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCL13O43927 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCL13O43927 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCL13O43927 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCL13O43927 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CXCL13O43927 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.21■□□□□ 0.02
CXCL13O43927 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CXCL13O43927 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CXCL13O43927 AC092068.3-201ENST00000587894 2016 ntBASIC15.21■□□□□ 0.02
CXCL13O43927 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.21■□□□□ 0.02
CXCL13O43927 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCL13O43927 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.2■□□□□ 0.02
CXCL13O43927 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CXCL13O43927 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.2■□□□□ 0.02
CXCL13O43927 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.2■□□□□ 0.02
CXCL13O43927 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.2■□□□□ 0.02
CXCL13O43927 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCL13O43927 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.2■□□□□ 0.02
CXCL13O43927 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.2■□□□□ 0.02
CXCL13O43927 AC040169.1-201ENST00000565382 521 ntBASIC15.2■□□□□ 0.02
CXCL13O43927 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.2■□□□□ 0.02
CXCL13O43927 ACTL9-202ENST00000612068 1252 ntBASIC15.2■□□□□ 0.02
CXCL13O43927 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 REXO1L3P-201ENST00000622202 1288 ntBASIC15.2■□□□□ 0.02
CXCL13O43927 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.2■□□□□ 0.02
CXCL13O43927 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CXCL13O43927 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.2■□□□□ 0.02
CXCL13O43927 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CXCL13O43927 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.2■□□□□ 0.02
CXCL13O43927 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.2■□□□□ 0.02
CXCL13O43927 AL021920.2-201ENST00000624828 1351 ntBASIC15.2■□□□□ 0.02
CXCL13O43927 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CXCL13O43927 AP001094.4-201ENST00000579008 2176 ntBASIC15.19■□□□□ 0.02
CXCL13O43927 BCAR1-209ENST00000546196 1340 ntBASIC15.19■□□□□ 0.02
CXCL13O43927 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCL13O43927 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCL13O43927 AL513480.1-201ENST00000451731 511 ntBASIC15.19■□□□□ 0.02
CXCL13O43927 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.19■□□□□ 0.02
CXCL13O43927 DUX4L17-201ENST00000557360 1267 ntBASIC15.19■□□□□ 0.02
CXCL13O43927 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCL13O43927 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.19■□□□□ 0.02
CXCL13O43927 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 AC004877.2-201ENST00000623941 599 ntBASIC15.19■□□□□ 0.02
CXCL13O43927 CROCCP1-201ENST00000426910 5675 ntBASIC15.19■□□□□ 0.02
CXCL13O43927 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.19■□□□□ 0.02
CXCL13O43927 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.19■□□□□ 0.02
CXCL13O43927 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CXCL13O43927 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms