Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXTL3O43909 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
EXTL3O43909 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
EXTL3O43909 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.41■□□□□ 0.54
EXTL3O43909 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
EXTL3O43909 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.41■□□□□ 0.54
EXTL3O43909 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
EXTL3O43909 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXTL3O43909 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EXTL3O43909 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
EXTL3O43909 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 AL353732.1-201ENST00000569618 1459 ntBASIC18.4■□□□□ 0.54
EXTL3O43909 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
EXTL3O43909 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.4■□□□□ 0.54
EXTL3O43909 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 AC092183.1-201ENST00000469884 875 ntBASIC18.4■□□□□ 0.54
EXTL3O43909 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 AP002490.2-201ENST00000524791 560 ntBASIC18.4■□□□□ 0.54
EXTL3O43909 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.4■□□□□ 0.54
EXTL3O43909 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.4■□□□□ 0.54
EXTL3O43909 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 FAM197Y3-203ENST00000618346 717 ntBASIC18.4■□□□□ 0.54
EXTL3O43909 AC010507.1-201ENST00000633895 436 ntBASIC18.4■□□□□ 0.54
EXTL3O43909 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
EXTL3O43909 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EXTL3O43909 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EXTL3O43909 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXTL3O43909 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXTL3O43909 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
EXTL3O43909 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EXTL3O43909 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.39■□□□□ 0.53
EXTL3O43909 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.39■□□□□ 0.53
EXTL3O43909 BX842568.4-201ENST00000421222 227 ntBASIC18.39■□□□□ 0.53
EXTL3O43909 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.39■□□□□ 0.53
EXTL3O43909 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.39■□□□□ 0.53
EXTL3O43909 RHOQP3-201ENST00000437982 621 ntBASIC18.39■□□□□ 0.53
EXTL3O43909 KRT18P2-201ENST00000447938 1258 ntBASIC18.39■□□□□ 0.53
EXTL3O43909 KRT18P3-201ENST00000451602 1288 ntBASIC18.39■□□□□ 0.53
EXTL3O43909 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EXTL3O43909 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.39■□□□□ 0.53
EXTL3O43909 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.39■□□□□ 0.53
EXTL3O43909 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.39■□□□□ 0.53
EXTL3O43909 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
EXTL3O43909 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EXTL3O43909 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
EXTL3O43909 LINC00895-201ENST00000629028 1637 ntBASIC18.38■□□□□ 0.53
EXTL3O43909 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
EXTL3O43909 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 SLC22A20-204ENST00000530038 1673 ntBASIC18.38■□□□□ 0.53
EXTL3O43909 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.38■□□□□ 0.53
EXTL3O43909 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EXTL3O43909 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
EXTL3O43909 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.38■□□□□ 0.53
EXTL3O43909 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.38■□□□□ 0.53
EXTL3O43909 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms