Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SYNGR3O43761 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.84□□□□□ -0.03
SYNGR3O43761 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.84□□□□□ -0.03
SYNGR3O43761 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SYNGR3O43761 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 ZNF259P1-201ENST00000407656 1365 ntBASIC14.84□□□□□ -0.03
SYNGR3O43761 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 FLJ38576-201ENST00000623820 2459 ntBASIC14.84□□□□□ -0.03
SYNGR3O43761 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.84□□□□□ -0.03
SYNGR3O43761 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SYNGR3O43761 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SYNGR3O43761 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SYNGR3O43761 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SYNGR3O43761 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SYNGR3O43761 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SYNGR3O43761 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
SYNGR3O43761 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.83□□□□□ -0.03
SYNGR3O43761 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SYNGR3O43761 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.03
SYNGR3O43761 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 PMS2P1-201ENST00000431037 1228 ntBASIC14.83□□□□□ -0.04
SYNGR3O43761 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.83□□□□□ -0.04
SYNGR3O43761 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 AC136632.2-201ENST00000512891 861 ntBASIC14.83□□□□□ -0.04
SYNGR3O43761 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 AC005593.1-201ENST00000624894 515 ntBASIC14.83□□□□□ -0.04
SYNGR3O43761 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SYNGR3O43761 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.83□□□□□ -0.04
SYNGR3O43761 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SYNGR3O43761 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SYNGR3O43761 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 AP002414.3-201ENST00000589352 1468 ntBASIC14.82□□□□□ -0.04
SYNGR3O43761 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SYNGR3O43761 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SYNGR3O43761 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNGR3O43761 AC073621.1-201ENST00000392730 636 ntBASIC14.82□□□□□ -0.04
SYNGR3O43761 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 SLC25A1P1-201ENST00000528351 927 ntBASIC14.82□□□□□ -0.04
SYNGR3O43761 AC145285.3-201ENST00000564603 959 ntBASIC14.82□□□□□ -0.04
SYNGR3O43761 AC106730.1-201ENST00000566722 1090 ntBASIC14.82□□□□□ -0.04
SYNGR3O43761 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.82□□□□□ -0.04
SYNGR3O43761 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SYNGR3O43761 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms